Pumpkin Chocolate Chip Cupcakes
Fall baking season is my favorite stretch of the year. The air cools down, the oven stops turning the kitchen into a sauna, and every counter suddenly smells like cinnamon.
Apples, maple, caramel, cinnamon, and pumpkin all start landing in my shopping cart at the same time. If you have ever wondered why pumpkin gets so much attention once the leaves change, one bite of these pumpkin chocolate chip cupcakes explains everything.
These cupcakes are light, soft, and full of pumpkin spice flavor. Mini chocolate chips hide in every crumb, and each one is crowned with a creamy chocolate buttercream plus a few extra chips on top. They taste like a crisp afternoon and a warm mug of coffee decided to become dessert.

Here is a confession. When I first considered pairing chocolate with pumpkin, I hesitated. Pumpkin already brings cinnamon, cloves, and nutmeg along for the ride, and chocolate is bold all by itself.
Would the two fight? Would it be too much at once? I tested it anyway, and the answer surprised me.
Warm pumpkin and creamy chocolate balance each other beautifully. These cupcakes are not overly sweet, yet they are absolutely packed with flavor.
I carried a batch to a neighborhood gathering last October and watched them vanish before the chili even reached the table. Is there anything better than a plate of cupcakes that makes people pause mid conversation?

If you are new to fall baking, this is a very good idea for a first project. The method is simple, the ingredients are easy to find, and the finished cupcakes look like you spent all day in the kitchen.
They also travel well, which matters to me because I am usually the one driving across town with a covered dish balanced on the passenger seat. I have taken them to potlucks, bake sales, and one very rainy soccer tournament, and they held up beautifully every time.
What I love most is how forgiving this recipe is. You do not need much beyond a mixer and a couple of bowls, and the whole thing comes together in one afternoon. It is the kind of dessert that fits a church supper, a classroom party, or a quiet Sunday with a pot of coffee.
Jump to:
- Pumpkin Chocolate Chip Cupcakes
- For the Pumpkin Chocolate Chip Cupcakes
- Then For the Chocolate Frosting
- Ingredients
- Instructions
- Notes
- Recipe details
- FAQs
- Can I use pumpkin pie filling instead of pumpkin puree for pumpkin chocolate chip cupcakes?
- How do I keep chocolate chips from sinking to the bottom of pumpkin cupcakes?
- How long do pumpkin chocolate chip cupcakes stay fresh and how should I store them?
- Can I freeze pumpkin chocolate chip cupcakes?
- Pumpkin Chocolate Chip Cupcakes
- Ingredients
- Instructions
- Last Step:
- Did you make this recipe?
For the Pumpkin Chocolate Chip Cupcakes
Every good cupcake starts with a balance of fat, sugar, and structure, and this batter gets that balance right. Oil is what keeps the cupcakes moist for days.
Two eggs add tenderness, and brown sugar brings a soft caramel note that plays nicely with the warm spices. A hint of cinnamon rounds out the flavor and makes the pumpkin taste more like pumpkin.
The texture trick here is all purpose flour combined with cornstarch. Cornstarch lightens the batter and helps build a fluffier crumb, so the cupcakes stay tender instead of turning dense. Pumpkin puree does double duty, adding both flavor and moisture.

The milk in the batter, whether you use buttermilk or regular milk, loosens things up so the crumb stays soft. If you happen to have buttermilk in the fridge, it adds a gentle tang that works nicely with the pumpkin and chocolate.
One warning worth repeating: use canned pumpkin puree, not pumpkin pie filling. Pumpkin pie filling already contains sugar, flavorings, and other ingredients, so it will throw off the recipe. And reach for mini chocolate chips rather than regular sized ones.
Mini chips are lighter, so they stay suspended in the batter instead of sinking to the bottom, and they are honestly cuter too.
Then For the Chocolate Frosting
The frosting on top is a simple buttercream made with cocoa powder. It comes together quickly, pipes like a dream, and tastes creamy, fluffy, and rich without burying the cupcakes underneath.
I usually frost these with a piping bag fitted with a 1M tip, which gives that classic swirl you see in bakery cases. If you are short on time, or you simply do not want to fuss with a bag, a knife works just fine.

Spread the frosting with the back of a spoon or an offset spatula and nobody at the table will complain.
The frosting is also flexible by design. You decide how much powdered sugar and whipping cream go in, so you can keep it softer for spreading or thicker for piping. Add the sugar gradually and taste as you go, since sweetness is a personal thing.
The frosting recipe makes enough for all 18 cupcakes, and a few extra chocolate chips pressed on top make them look finished without any decorating skill required.

If pumpkin season makes you want to bake everything in sight, these cupcakes are a great starting point, and there are plenty of other pumpkin desserts worth trying. A pumpkin cheesecake with salted caramel sauce, pumpkin chocolate chip muffins, and pumpkin spice cookies all belong on the same fall baking list.
These cupcakes are a slight twist on classic fall baking, full of pumpkin flavor and made richer by chocolate. They are moist, warmly spiced, and generous with chocolate in every bite.
Ingredients
This recipe makes about 18 cupcakes and uses two short lists. Gather everything before you start, because once the mixer is running the process moves quickly. Most of these are pantry staples, and the only items you might need to pick up are pumpkin puree and mini chocolate chips.
For the cupcakes
- 1 1/4 cups all purpose flour
- 1/4 cup cornstarch
- 1 tsp baking powder
- 1/2 tsp baking soda
- 1/4 tsp salt
- 1 1/2 tsp ground cinnamon
- 1 pinch ground cloves
- 1 pinch nutmeg
- 1/2 cup vegetable oil
- 2/3 cup packed brown sugar
- 2/3 cup white sugar
- 2 large eggs, room temperature
- 1 1/2 tsp vanilla extract
- 1 cup pumpkin puree, not pumpkin pie filling
- 1/3 cup milk, buttermilk or regular
- 3/4 cup mini chocolate chips
For the chocolate frosting
- 1 cup unsalted butter, room temperature
- 3 to 4 cups powdered sugar, sifted
- 3/4 cup cocoa powder, sifted
- 6 to 8 tablespoons whipping cream
- 1/4 cup mini chocolate chips, for decorating
Room temperature butter and eggs matter more than you might think. They blend into the batter and frosting more smoothly, which means a lighter texture and fewer lumps.
Instructions
The cupcakes and the frosting come together in two easy stages. Start with the cupcakes so they have time to cool before you frost them.
Make the pumpkin chocolate chip cupcakes
- Preheat the oven to 365F and line 2 muffin pans with large muffin papers. You will end up with about 18 cupcakes total.
- In a medium bowl, whisk together the flour, cornstarch, baking powder, baking soda, salt, cinnamon, nutmeg, and cloves.
- In a separate large bowl, beat the oil and both sugars with an electric mixer. Then beat in the eggs and the vanilla.
- Turn off the mixer and stir in the pumpkin puree by hand.
- With the electric mixer on low speed, beat in the flour mixture alternately with the milk.
- Turn off the mixer and stir in the mini chocolate chips.
- Spoon the batter into the prepared muffin pans, filling each cup about 2/3 full.
- Bake for 15 to 18 minutes, until a toothpick inserted into the center comes out clean.
Make the chocolate frosting
- In a large bowl using a stand mixer, beat the butter until it is very fluffy.
- Turn the mixer to low speed and beat in 2 cups of the powdered sugar, followed by the cocoa powder.
- Beat in the rest of the powdered sugar about 1/2 cup at a time, alternating with 1 to 2 tablespoons of whipping cream, until you reach the consistency and sweetness you like.
- Frost the cooled cupcakes with a piping bag, using a 1M tip for a classic swirl, or with a knife. Decorate with more chocolate chips.
Let the cupcakes cool completely before frosting, or the buttercream will slide right off the warm tops. I like to set the frosted cupcakes in the fridge for a few minutes before packing them up, just so the swirl holds its shape on the drive over.
If you want neat, even cupcakes, use a large cookie scoop or a measuring cup to portion the batter. A quick tap of the pan on the counter settles the batter, and rotating the pans halfway through baking helps everything brown evenly.
Notes
Mini chocolate chips are the recommended choice here. Larger chocolate chips are heavier, so they tend to sink to the bottom of the cupcakes while they bake. Mini chips stay evenly distributed, which means chocolate in every bite instead of a chocolate puddle at the base.
Use mini chocolate chips, not regular sized ones, so the chocolate stays suspended in the batter rather than dropping to the bottom of the pan.
Recipe details
Here is the quick overview so you can plan your baking session.
| Detail | Amount |
|---|---|
| Prep time | 30 minutes |
| Cook time | 15 minutes |
| Total time | 1 hour 30 minutes |
| Servings | 18 cupcakes |
Prep takes about 30 minutes, baking takes 15 minutes, and the full process from mixing bowls to frosted cupcakes runs about 1 hour 30 minutes once cooling time is included.
FAQs
Can I use pumpkin pie filling instead of pumpkin puree for pumpkin chocolate chip cupcakes?
No, you must use 100% pure pumpkin puree, not pumpkin pie filling. Pumpkin pie filling contains added sugar, spices, and thickeners that will alter the texture, sweetness, and overall balance of the recipe. The canonical recipe calls for 1 cup of pumpkin puree, and using the wrong ingredient will likely result in dense, overly sweet cupcakes.
How do I keep chocolate chips from sinking to the bottom of pumpkin cupcakes?
Use mini chocolate chips instead of regular-sized chips, as the canonical recipe specifies 3/4 cup of mini chocolate chips. Their smaller size distributes more evenly through the batter and is less likely to sink. For extra insurance, toss the mini chips in 1 tablespoon of flour before folding them into the batter by hand.
How long do pumpkin chocolate chip cupcakes stay fresh and how should I store them?
Unfrosted pumpkin chocolate chip cupcakes can be stored at room temperature in an airtight container for up to 3 days. If frosted with chocolate buttercream, refrigerate the cupcakes in an airtight container, but bring them to room temperature before serving for the best flavor and texture. The oil in the recipe helps keep the crumb moist for several days.
Can I freeze pumpkin chocolate chip cupcakes?
Yes, you can freeze unfrosted pumpkin chocolate chip cupcakes for up to 3 months. Place the completely cooled cupcakes on a baking sheet until firm, then wrap each one individually in plastic wrap and store in a freezer-safe bag. Thaw them at room temperature before frosting and serving.

Pumpkin Chocolate Chip Cupcakes
Pumpkin Chocolate Chip Cupcakes Fall baking season is my favorite stretch of the year. The air cools down, the oven stops turning the kitchen into a sauna, and every counter suddenly smells like cinnamon.
- Total Time: 90 min
- Yield: 18 cupcakes 1x
Ingredients
Pumpkin Chocolate Chip Cupcakes
1 1/4 cup all-purpose flour
1/4 cup cornstarch
1 tsp baking powder
1/2 tsp baking soda
1/4 tsp salt
1 1/2 tsp ground cinnamon
1 pinch ground cloves
1 pinch nutmeg
1/2 cup vegetable oil
2/3 cup brown sugar, packed
2/3 cup white sugar
2 large eggs, room temperature
1 1/2 tsp vanilla extract
1 cup pumpkin puree, not pumpkin pie filling
1/3 cup milk, buttermilk or regular
3/4 cup mini chocolate chips
Chocolate Frosting
1 cup unsalted butter, room temperature
3–4 cups powdered sugar, sifted
3/4 cup cocoa powder, sifted
6–8 tablespoons whipping cream
1/4 cup mini chocolate chips, for decorating
Instructions
Make the Pumpkin Chocolate Chip Cupcakes
1-Preheat the oven to 365F degrees: Preheat the oven to 365F degrees.
2-Line 2 muffin pans with large muffin: Line 2 muffin pans with large muffin papers (you’ll end up with about 18 cupcakes total).
3-In a medium bowl whisk together the: In a medium bowl whisk together the flour, cornstarch, baking powder, baking soda, salt, cinnamon, nutmeg & cloves
4-In a separate large bowl beat together: In a separate large bowl beat together the oil and sugars using an electric mixer. Then beat in the eggs and vanilla.
5-Turn off the mixer and stir in: Turn off the mixer and stir in the pureed pumpkin.
6-With the electric mixer on low speed,: With the electric mixer on low speed, beat in the flour mixture alternating with the milk.
7-Turn off the mixer and stir in: Turn off the mixer and stir in the mini chocolate chips.
8-Spoon the batter into the prepared muffin: Spoon the batter into the prepared muffin pan, filling each about 2/3 full. Bake for 15-18 minutes, or until an inserted toothpick comes out clean.
Make the Chocolate Frosting
9-In a large bowl using a stand: In a large bowl using a stand mixer, beat the butter until very fluffy.
10-Turn the mixer to low speed and: Turn the mixer to low speed and beat in 2 cups of the powdered sugar, followed by the cocoa powder.
11-Beat in the rest of the powdered: Beat in the rest of the powdered sugar about 1/2 cup at a time alternating with 1-2 tablespoon of whipping cream until the desired consistency and sweetness level is reached.
12-Frost the cooled cupcakes with a piping: Frost the cooled cupcakes with a piping bag (I used a 1M tip) or a knife. Decorate with more chocolate chips.
Last Step:
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- Cook Time: 15 min
- Method: bake





